methods

Is there any paper about data processing method and mode processing method?

Most papers have the details. E.g., Biswal et al. (1995 (MRM) for functinal connectivity, Zang et al. (2004, NeuroImage) for ReHo, Zang et al. (2007, Brain Dev) for ALFF, and Zou et al. (2008, J Neurosci Methods) for fALFF.