DPARSFA 2.3 - new segment + DARTEL

Submitted by ImKi on Tue, 04/22/2014 - 20:57

Dear all,

I run DPARSFA starting with nifti files and so far it went more or less okay, but I get error messages for the new segment + DARTEL step:

Error using cfg_util (line 835)
Job execution failed. The full log of this run can be found in MATLAB command window, starting with
the lines (look for the line showing the exact #job as displayed in this error message)
------------------
Running job #1
------------------

Error in spm_jobman (line 217)

Error in DPARSFA_run>(parfor body) (line 1676)

Error in DPARSFA_run (line 1653)

Error in DPARSFA>pushbuttonRun_Callback (line 1601)

Error in gui_mainfcn (line 96)

Error in DPARSFA (line 33)

Caused by:
    Error using cfg_util (line 835)
    Job execution failed. The full log of this run can be found in MATLAB command window, starting
    with the lines (look for the line showing the exact #job as displayed in this error message)
    ------------------
    Running job #1
    ------------------
    
Error while evaluating uicontrol Callback

>>

I got it when I started from nifti and had DARTEL do all steps before, I got it when I started later from FunImgAR, I also got it after I reinstalled SPM8. I switched from Matlab 2010a to Matlab 2013a, I still get the same error. Anyone can help me find a solution?

Thanks a lot!

Submitted by kmartucci on Sat, 05/24/2014 - 06:46

 

Hello,

I too am having a similar problem after trying to run this on different machines and old/new versions of Matlab. 

Mine starts with a few additional errors.

Any help would be appreciated!

Thanks,
Katie

 > In spm_jobman at 217
This repeats numerous times:

[Warning: Matrix is singular, close to singular or badly scaled. Results may be inaccurate.
RCOND = NaN. 
> In expm>PadeApproximantOfDegree at 123
  In expm at 39
  In spm_maff8>P2M at 282
  In spm_maff8>affreg at 242
  In spm_maff8 at 27
  In spm_preproc_run>run_job at 83
  In spm_preproc_run at 30
  In tbx_cfg_preproc8>spm_local_preproc_run at 363
  In matlabbatch\private\cfg_run_cm at 29
  In cfg_util>local_runcj at 1510
  In cfg_util at 830
  In spm_jobman at 217
  In DPARSFA_run>(parfor body) at 1676
  In parallel_function at 468
  In DPARSFA_run at 1653
  In DPARSFA>pushbuttonRun_Callback at 1601
  In gui_mainfcn at 96
  In DPARSFA at 33 ]
 
Failed  'New Segment'
Error using schur
Input to SCHUR must not contain NaN or Inf.
In file "C:\Program Files\MATLAB\R2012b\toolbox\matlab\matfun\sqrtm.m" (???), function "sqrtm" at line 33.
In file "C:\Users\SNAPL\Documents\MATLAB\spm8\toolbox\Seg\spm_maff8.m" (v4152), function "M2P" at line 250.
In file "C:\Users\SNAPL\Documents\MATLAB\spm8\toolbox\Seg\spm_maff8.m" (v4152), function "affreg" at line 111.
In file "C:\Users\SNAPL\Documents\MATLAB\spm8\toolbox\Seg\spm_maff8.m" (v4152), function "spm_maff8" at line 27.
In file "C:\Users\SNAPL\Documents\MATLAB\spm8\toolbox\Seg\spm_preproc_run.m" (v4334), function "run_job" at line 84.
In file "C:\Users\SNAPL\Documents\MATLAB\spm8\toolbox\Seg\spm_preproc_run.m" (v4334), function "spm_preproc_run" at line 30.
In file "C:\Users\SNAPL\Documents\MATLAB\spm8\toolbox\Seg\tbx_cfg_preproc8.m" (v4337), function "spm_local_preproc_run" at line 363.
 
The following modules did not run:
Failed: New Segment
 
Error using cfg_util (line 835)
Job execution failed. The full log of this run can be found in MATLAB command window,
starting with the lines (look for the line showing the exact #job as displayed in this
error message)
------------------
Running job #1
------------------
 
 
Error in spm_jobman (line 217)
 
Error in DPARSFA_run>(parfor body) (line 1676)
 
Error in parallel_function (line 468)
 
Error in DPARSFA_run (line 1653)
 
Error in DPARSFA>pushbuttonRun_Callback (line 1601)
 
Error in gui_mainfcn (line 96)
 
Error in DPARSFA (line 33)
 
Error while evaluating uicontrol Callback
 
>>