Submitted by lihong on Mon, 08/16/2010 - 17:33
我的dparsf是这样设置的,但是RUN的时候出现了下面的问题:
Citing Information:
If you think DPARSF is useful for your work, citing it in your paper would be greatly appreciated.
Something like "... preprocessing were carried out using Statistical Parametric Mapping (SPM5, http://www.fil.ion.ucl.ac.uk/spm) and Data Processing Assistant for Resting-State fMRI (DPARSF) (Yan and Zang, 2010) ..." in your method session would be fine. If FC, ReHo, ALFF or fALFF is computed, please also cite Resting-State fMRI Data Analysis Toolkit (REST, by Song et al., http://www.restfmri.net).
Reference: Yan C and Zang Y (2010) DPARSF: a MATLAB toolbox for "pipeline" data analysis of resting-state fMRI. Front. Syst. Neurosci. 4:13. doi:10.3389/fnsys.2010.00013
Warning: In the directory "E:\tool\spm5", spm_unlink.mexw32 now shadows spm_unlink.dll.
Please see the MATLAB 7.1 Release Notes.
> In DPARSF>DPARSF_OpeningFcn at 147
In gui_mainfcn at 221
In DPARSF at 39
Warning: In the directory "E:\tool\spm5", spm_atranspa.mexw32 now shadows spm_atranspa.dll.
Please see the MATLAB 7.1 Release Notes.
> In DPARSF>DPARSF_OpeningFcn at 147
In gui_mainfcn at 221
In DPARSF at 39
Warning: Directory already exists.
> In DPARSF_run at 212
In DPARSF>pushbuttonRun_Callback at 935
In gui_mainfcn at 96
In DPARSF at 39
Chris Rorden's dcm2nii :: 1 April 2010
reading preferences file E:\tool\DPARSF_V1.0_100510\dcm2nii\dcm2nii.ini
reading preferences file DCM2NII.INI
0 E:\tool\DPARSF_V1.0_100510\dcm2nii\dcm2nii.exe ERROR: unable to find subject\FunImg\chang_hai_yan E:\new subject\FunRaw\chang_hai_yan\1.3.12.2.1107.5.2.32.35362.2008100919453668288473544.dcm
Either drag and drop or specify command line options:
dcm2nii <options> <sourcenames>
OPTIONS:
-a Anonymize [remove identifying information]: Y,N = Y
-b load settings from specified inifile, e.g. '-b C:\set\t1.ini'
-c Collapse input folders: Y,N = N
-d Date in filename [filename.dcm -> 20061230122032.nii]: Y,N = Y
-e events (series/acq) in filename [filename.dcm -> s002a003.nii]: Y,N = Y
-f Source filename [e.g. filename.par -> filename.nii]: Y,N = N
-g gzip output, filename.nii.gz [ignored if '-n n']: Y,N = N
-i ID in filename [filename.dcm -> johndoe.nii]: Y,N = Y
-n output .nii file [if no, create .hdr/.img pair]: Y,N = N
-o Output Directory, e.g. 'C:\TEMP' (if unspecified, source directory is used)
-p Protocol in filename [filename.dcm -> TFE_T1.nii]: Y,N = Y
-r Reorient image to nearest orthogonal: Y,N
-s SPM2/Analyze not SPM5/NIfTI [ignored if '-n y']: Y,N = N
-v Convert every image in the directory: Y,N = Y
-x Reorient and crop 3D NIfTI images: Y,N = N
You can also set defaults by editing DCM2NII.INI
EXAMPLE: dcm2>>
请问是什么原因?以前我做的时候没有碰到不能转换格式的问题,现在第一步就出现问题了
请问是什么原因?以前我做的时候没有碰到不能转换格式的问题,现在第一步就出现问题了
Submitted by dongzy08 on Tue, 08/17/2010 - 21:51 Permalink
您好
检查下E:\new subject\FunRaw\chang_hai_yan\目录下,是否存在
1.3.12.2.1107.5.2.32.35362.2008100919453668288473544.dcm这个文件。
另外,在用DPARSF跑数据时,路径最好不要有空格,E:\new subject\改成E:\new_subject\